Information for 5-GCCCAGCCTGACT (Motif 7)

A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T
Reverse Opposite:
C G T A A C T G A G C T A G T C C T G A A C T G A C T G A G T C A C G T A C T G A C T G A C T G A T G C
p-value:1e-10
log p-value:-2.364e+01
Information Content per bp:1.925
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 29.9bp
Average Position of motif in Background51.3 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGCCTGACT
TGCCCAGNHW----
 A C G T A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCCAGCCTGACT--
GTCATGCHTGRCTGS
 A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGCCTGACT
GAGCACAGCAGGACA
 A C G T A C G T A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGCCTGACT
CCACACAGCAGGAGA
 A C G T A C G T A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCCAGCCTGACT
DCTCAGCAGG---
 A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGCCTGACT
CCACACAGCAGGAGA
 A C G T A C G T A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCCAGCCTGACT--
TCCCAGMCRAGCCCC
 A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCCCAGCCTGACT
--BCAGACWA---
 A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCCCAGCCTGACT
---CAGCC-----
 A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCCAGCCTGACT
GCAGCCAAGCGTGACN
 A C G T A C G T A C G T A T C G A G T C A G T C A G T C C G T A A C T G A G T C A G T C A G C T A C T G C T G A A G T C A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C