Information for 6-CGCTCTAGAG (Motif 17)

A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G
Reverse Opposite:
A G T C A G C T A T G C C A G T T C G A T C A G C T G A T A C G T G A C T A C G
p-value:1e-5
log p-value:-1.364e+01
Information Content per bp:1.657
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif8.08%
Number of Background Sequences with motif2201.4
Percentage of Background Sequences with motif4.53%
Average Position of motif in Targets50.3 +/- 26.5bp
Average Position of motif in Background50.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGCTCTAGAG--
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGCTCTAGAG---
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCTCTAGAG--
GGCTCYAKCAYC
 A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCTCTAGAG
NSCACTYVAV
 A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCTCTAGAG
RSCACTYRAG
 A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCTCTAGAG
NGCTN-----
 A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGCTCTAGAG---
TTGCCCTAGGGCAT
 A C G T A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G A C G T A C G T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGCTCTAGAG-
NGTCCCNNGGGA
 A C G T A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGCTCTAGAG
AGCCACTCAAG--
 A C G T A C G T A C G T A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:-8
Orientation:forward strand
Alignment:--------CGCTCTAGAG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T G C A G C T A G T C A G C T G T C A A T C G T C G A T C A G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C