Information for 10-GYGGCTTTTTGCC (Motif 16)

C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C
Reverse Opposite:
A C T G C T A G A T G C C G T A T G C A C G T A G T C A C G T A A C T G A G T C A T G C C T A G G T A C
p-value:1e-6
log p-value:-1.547e+01
Information Content per bp:1.832
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.2 +/- 19.4bp
Average Position of motif in Background45.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GYGGCTTTTTGCC-
TTGGCATGGTGCCA
 C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GYGGCTTTTTGCC--
CTTGGCANNNTGCCAA
 A C G T C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GYGGCTTTTTGCC--
-TGGCAGNCTGCCAG
 C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T A C G T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GYGGCTTTTTGCC
---YCTTTGTTCC
 C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GYGGCTTTTTGCC--
-----TRTTTACTTW
 C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GYGGCTTTTTGCC
----CTGTTTAC-
 C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GYGGCTTTTTGCC
---CCWTTGTYYB
 C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GYGGCTTTTTGCC----
--ANATTTTTGCAANTN
 C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GYGGCTTTTTGCC
GGNGCGNCTGTTNNN-
 A C G T A C G T A C G T C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GYGGCTTTTTGCC-
-------TTTTCCA
 C A T G A G T C A T C G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A