Information for 9-CCTGGTTTGCTTG (Motif 15)

A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A G T C C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.617e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.5 +/- 20.0bp
Average Position of motif in Background52.6 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGTTTGCTTG-
GYCTGGYYTNTGTCA
 A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG-
------TTGATTGN
 A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG---
------TTGCGTGCVA
 A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG----
-----TTTGATTGATGN
 A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGTTTGCTTG-
NNNNTTGTGTGCTTNN
 A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCTGGTTTGCTTG-
-TTCATTTGCATAT
 A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTTTGCTTG
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCTGGTTTGCTTG
CCWGGAATGY---
 A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTTTGCTTG
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG
-CTCATTTGCATW
 A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A