Information for 3-TGGCACTGGCGCC (Motif 5)

A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C
Reverse Opposite:
A C T G C T A G A T G C A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.251e+01
Information Content per bp:1.897
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.3 +/- 32.7bp
Average Position of motif in Background55.0 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGCACTGGCGCC-----
-NNNNTTGGCGCCGANNN
 A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGCACTGGCGCC
NTTGGCANN------
 A C G T A C G T A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGCACTGGCGCC-----
-NNNNTTGGCGCCGANNN
 A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGCACTGGCGCC---
----TTTGGCGCCAAA
 A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGCACTGGCGCC
TTGGCA--------
 A C G T A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGGCACTGGCGCC
NNTTGGCANN------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGGCACTGGCGCC
GGTTGGCAT-------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGCACTGGCGCC
-GRTGMTRGAGCC
 A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGGCACTGGCGCC
-TGCGCAGGCGC-
 A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGCACTGGCGCC
CTTGGCAA-------
 A C G T A C G T A C G T A C T G A C T G A G T C G C T A A G T C A C G T A C T G A C T G T A G C A T C G A G T C A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T