Information for 1-GGGAGGGCAA (Motif 4)

A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A
Reverse Opposite:
A G C T A G C T A T C G A G T C A G T C A T G C C G A T T G A C A G T C A G T C
p-value:1e-9
log p-value:-2.287e+01
Information Content per bp:1.834
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.14%
Number of Background Sequences with motif522.0
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets50.4 +/- 28.1bp
Average Position of motif in Background50.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GGGAGGGCAA--
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGGAGGGCAA
TGGGGAAGGGCM-
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGGGCAA
GGGGGCGGGGC-
 A C G T A C G T A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGAGGGCAA-
GGGCGGGAAGG
 A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGGCAA
GGGGNGGGGC-
 A C G T A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGAGGGCAA
GGGGGGGG--
 A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A
C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGGAGGGCAA
-TNNGGGCAG
 A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GGGAGGGCAA
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGGGCAA--
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGGGCAA
GTGGGGGAGGGG--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A T A C G C T A G T C A G T A G C C T G A C T G A
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T