Information for 5-GGGCGCGCCTGGCGGG (Motif 17)

A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C A G T C A C T G A T G C G T A C C G T A A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A G T C
p-value:1e-4
log p-value:-9.857e+00
Information Content per bp:1.943
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 25.1bp
Average Position of motif in Background64.9 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0009.1_E2F3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGGCGCGCCTGGCGGG
ATAAGGGCGCGCGAT-----
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGCGCGCCTGGCGGG
-GGNGCGNCTGTTNNN
 A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGGCGCGCCTGGCGGG
ATAAAGGCGCGCGAT-----
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGCGCGCCTGGCGGG
-GCCGCGCAGTGCGT-
 A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGCGCGCCTGGCGGG
TTGGGGGCGCCCCTAG----
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGCGCGCCTGGCGGG
-AGCGCGCC-------
 A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGGCGCGCCTGGCGGG
TGGCGCGCGCGCCTGA----
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGCGCCTGGCGGG
NNGGCCACGCCTTTN---
 A C G T A C G T A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGCGCGCCTGGCGGG
DGGGYGKGGC-------
 A C G T A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGGCGCGCCTGGCGGG-----
----NAGANTGGCGGGGNGNA
 A C T G A C T G A C T G A G T C A C T G A G T C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A C T G A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A