Information for 6-BCAAAAAACAAAAACC (Motif 9)

A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
Reverse Opposite:
A T C G C T A G C G A T C G A T A C G T A C G T A G C T A C T G A G C T C G A T A C G T A C G T A C G T A G C T A C T G T A C G
p-value:1e-12
log p-value:-2.917e+01
Information Content per bp:1.819
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 25.6bp
Average Position of motif in Background18.3 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-BCAAAAAACAAAAACC
ATATCAAAACAAAACA-
 A C G T A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:BCAAAAAACAAAAACC
--AAATAAGAAAAAAC
 A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:BCAAAAAACAAAAACC
----WAAGTAAAYA--
 A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:BCAAAAAACAAAAACC--
-AGAAGAACAAAGGACTA
 A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-BCAAAAAACAAAAACC
AACAAACAACAAGAG--
 A C G T A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--BCAAAAAACAAAAACC
GTTCAAAAAAAAAATTC-
 A C G T A C G T A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:BCAAAAAACAAAAACC
-----AAATAAACA--
 A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:BCAAAAAACAAAAACC
----AAAACAAAGG--
 A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:BCAAAAAACAAAAACC
-AAAAAATCAATAAT-
 A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:BCAAAAAACAAAAACC
----AAAGTAAACA--
 A G T C T G A C C T G A G T C A C G T A C G T A C G T A C T G A A G T C C T G A C G T A C G T A C G T A C G T A G A T C A T G C
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T