Information for 5-GAGCCCRGGTCGCAAR (Motif 5)

T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G
Reverse Opposite:
A G T C A G C T A C G T A T C G T A G C T A C G C T G A A T G C A T G C A G T C A C T G C T A G A T C G A G T C G A C T A G T C
p-value:1e-15
log p-value:-3.624e+01
Information Content per bp:1.656
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.9 +/- 26.0bp
Average Position of motif in Background51.8 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGCCCRGGTCGCAAR
GAGSCCGAGC------
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGCCCRGGTCGCAAR
CAGGCCNNGGCCNN--
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAGCCCRGGTCGCAAR
GAGCCCTTGTCCCTAA
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAGCCCRGGTCGCAAR
-TGCCCNNAGGGCA--
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAGCCCRGGTCGCAAR
-TGCCCTGAGGGCA--
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GAGCCCRGGTCGCAAR
--NNCCACGTGG----
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G
A C G T A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GAGCCCRGGTCGCAAR
---NNCAGGTGNN---
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GAGCCCRGGTCGCAAR-----
----TTAGGTCGTAAAATTTC
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GAGCCCRGGTCGCAAR-----
----CAAGGTCGTAAAATCTT
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GAGCCCRGGTCGCAAR
-TGCCCTGAGGGCA--
 T A C G C G T A C T A G T A G C A G T C G T A C T C A G T A C G A T C G G A C T A T G C A C T G A T G C G T C A C T G A T C A G
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T