Information for 24-MATCRCTAGYMAC (Motif 45)

G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C T A G A G T C A C G T C G T A A C T G A G C T A C T G C G T A A C G T A C G T
p-value:1e-3
log p-value:-7.423e+00
Information Content per bp:1.883
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 27.1bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0054.1_Rfx3_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---MATCRCTAGYMAC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:MATCRCTAGYMAC--
---SCCTAGCAACAG
 G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MATCRCTAGYMAC---
-TACCATAGCAACGGT
 G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C A C G T A C G T A C G T
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MATCRCTAGYMAC---
-CCGCATAGCAACGGA
 G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C A C G T A C G T A C G T
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-MATCRCTAGYMAC--
CAATCACTGGCAGAAT
 A C G T G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

ONECUT1/MA0679.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----MATCRCTAGYMAC
AAAAAATCGATAAT---
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--MATCRCTAGYMAC
CAAATCACTG-----
 A C G T A C G T G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----MATCRCTAGYMAC
AAAAAATCGATAAT---
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-MATCRCTAGYMAC
DGATCRATAN----
 A C G T G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-MATCRCTAGYMAC
TAATCGATAA----
 A C G T G T C A C G T A A C G T A G T C C T G A A G T C A C G T C G T A A C T G A G T C G T A C C G T A A G T C
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T A C G T A C G T