Information for 25-GCAGAAGGATCCAGGA (Motif 42)

A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C A C G T C T A G A C T G C G T A A C G T A G T C A G T C A G C T A C G T A G T C C G A T C T A G A G T C
p-value:1e-4
log p-value:-9.605e+00
Information Content per bp:1.928
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.5 +/- 20.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCAGAAGGATCCAGGA
-TAGAANVTTCTAGAA
 A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

HSF4/MA0771.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCAGAAGGATCCAGGA
---GAANNTTCTAGAA
 A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A
A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAGAAGGATCCAGGA
---GAACGTTCTAGAA
 A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A
A C G T A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAGAAGGATCCAGGA--
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HSF2/MA0770.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAGAAGGATCCAGGA
---GAANGTTCTAGAA
 A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A
A C G T A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GCAGAAGGATCCAGGA--
------GGCTCYAKCAYC
 A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCAGAAGGATCCAGGA--
---BCNGGTTCTAGANCN
 A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCAGAAGGATCCAGGA
--ANCAGGATGT----
 A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A
A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCAGAAGGATCCAGGA
GGAGAAAGGTGCGA--
 A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GCAGAAGGATCCAGGA--
---NNNGTAACTANGNNA
 A C T G A G T C C G T A A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A G T C C G T A A C T G A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A