Information for 15-TGGAKRGTRC (Motif 41)

G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C
Reverse Opposite:
A C T G A G T C C T G A G T A C A G C T T G A C C G A T G T A C A G T C C T G A
p-value:1e-4
log p-value:-1.147e+01
Information Content per bp:1.767
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif212.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets53.5 +/- 25.3bp
Average Position of motif in Background51.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGGAKRGTRC-----
GCTGGGGGGTACCCCTT
 A C G T A C G T G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGAKRGTRC-------
TTCNAAGTACTTNNNNN
 G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGAKRGTRC
CGTGGGTGGTCC
 A C G T A C G T G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGGAKRGTRC
GTGGAT-----
 A C G T G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGGAKRGTRC--
--TTAAGTGCTT
 G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGAKRGTRC-------
CGAACAGTGCTCACTAT
 G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

GLIS3/MA0737.1/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAKRGTRC
CTTCGTGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TGGAKRGTRC---
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

HES7/MA0822.1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGGAKRGTRC--
TGGCACGTGCCA
 G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C A C G T A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TGGAKRGTRC--
GGAGAAAGGTGCGA
 A C G T A C G T G A C T A C T G A C T G C G T A A C T G C T G A A C T G A G C T C T A G A G T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A