Information for 11-TTTTSYCVTG (Motif 37)

A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G T A C G C T G A A T G C C G T A C G T A C G T A C T G A
p-value:1e-6
log p-value:-1.504e+01
Information Content per bp:1.760
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif7.12%
Number of Background Sequences with motif1236.3
Percentage of Background Sequences with motif2.77%
Average Position of motif in Targets53.1 +/- 29.4bp
Average Position of motif in Background51.1 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTTSYCVTG-----
CTTTGTTATGCAAAT
 A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTTSYCVTG---
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTTSYCVTG--
TTTTTTTTCNNGTN
 A C G T A C G T A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTTSYCVTG
CCTTTGTTTT-
 A C G T A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTTSYCVTG--
NNAATTAGTCACGGT
 A C G T A C G T A C G T A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTTTSYCVTG
HTTTCCCASG
 A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTTSYCVTG
ATTTTCCATT-
 A C G T A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTTSYCVTG-----
CATTGTTATGCAAAT
 A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTTTSYCVTG
TTTTCCA---
 A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTTSYCVTG
ATTTTCCATT-
 A C G T A G C T A C G T A C G T C G A T A T C G A G C T A T G C T G A C A C G T A C T G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T