Information for 3-TGAAGGSCYTGARATC (Motif 3)

A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C
Reverse Opposite:
C A T G C T G A C G A T A G C T A C G T A G T C G T C A C T A G C A T G A T C G G T A C A G T C A C G T A C G T A G T C C T G A
p-value:1e-16
log p-value:-3.751e+01
Information Content per bp:1.756
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 24.2bp
Average Position of motif in Background32.5 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Vdr/MA0693.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAAGGSCYTGARATC
TGAACTCNATGAACTC
 A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGAAGGSCYTGARATC
NGAAGC----------
 A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGAAGGSCYTGARATC
CNTTAAGTACTTAANG--
 A C G T A C G T A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGAAGGSCYTGARATC
TTTTAAGTACTTAAATT-
 A C G T A C G T A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGAAGGSCYTGARATC-
TGAATTCCTAGAAAGCA
 A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.49
Offset:7
Orientation:forward strand
Alignment:TGAAGGSCYTGARATC-
-------ACTGAAACCA
 A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TGAAGGSCYTGARATC
GGAGAAAGGTGCGA----
 A C G T A C G T A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.48
Offset:3
Orientation:forward strand
Alignment:TGAAGGSCYTGARATC
---AGGCCTNG-----
 A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:TGAAGGSCYTGARATC
-GCTGACCTTGAACTN
 A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:TGAAGGSCYTGARATC
TGAACCCGATGACCC-
 A G C T A C T G C G T A C G T A C T A G A C T G A T G C G A T C A G T C A C G T C T A G C G T A C T G A C G T A A G C T G T A C
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C A C G T