Information for 17-CAAATGADGAGTAAAA (Motif 25)

A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T G T C A A G T C A C G T G T A C G C T A C G A T A T G C C T G A A C G T C G A T A C G T A C T G
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.797
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 21.1bp
Average Position of motif in Background11.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:CAAATGADGAGTAAAA
---------TGGAAAA
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

Pax6/MA0069.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAAATGADGAGTAAAA
-AANTCATGCGTGAA-
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A
A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CAAATGADGAGTAAAA-
------GGTCGTAAAAA
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CAAATGADGAGTAAAA-
------AGTCGTAAAAA
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CAAATGADGAGTAAAA-
-------AATGGAAAAT
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CAAATGADGAGTAAAA-
-------GTCGTAAAAA
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CAAATGADGAGTAAAA
-------AGAGGAA--
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CAAATGADGAGTAAAA-
-------NATGGAAAAN
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CAAATGADGAGTAAAA-
-------AAAGTAAACA
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAAATGADGAGTAAAA----
----CTACCAATAAAATTCT
 A G T C G T C A G C T A G T C A A G C T A T C G C G T A C A G T A C T G C G T A A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T