Information for 7-GTAAAGCTCTCGTGAA (Motif 12)

C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A
Reverse Opposite:
C G A T A C G T A G T C C G T A A T G C A C T G C T G A A T C G C G T A A C T G A G T C C G A T A C G T A C G T G T C A A G T C
p-value:1e-11
log p-value:-2.707e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 7.5bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTAAAGCTCTCGTGAA------
NTNNTNGTCACGTGACNNNTNC
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C

Mitf/MA0620.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GTAAAGCTCTCGTGAA-
-------NCACGTGACN
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GTAAAGCTCTCGTGAA--
-------GCTCGTAAAAA
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTAAAGCTCTCGTGAA----
----AAACCTCGTAAAATTT
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GTAAAGCTCTCGTGAA
------ATCACGTGAC
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GTAAAGCTCTCGTGAA
------ATCACGTGAC
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GTAAAGCTCTCGTGAA
-----GGTCACGTGA-
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A
A C G T A C G T A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GTAAAGCTCTCGTGAA
------ATCACGTGAC
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C

MLX/MA0663.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GTAAAGCTCTCGTGAA
------ATCACGTGAT
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T

ZBTB33/MA0527.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTAAAGCTCTCGTGAA
-NAGNTCTCGCGAGAN
 C T A G A C G T C G T A C G T A C G T A A C T G A G T C A C G T A T G C A G C T A G T C A T C G A C G T A C T G C G T A G C T A
A C G T T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G