Information for 1-CCCTRTGTTCCAGGCC (Motif 1)

T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C
Reverse Opposite:
A C T G A T C G A T G C A G T C C A G T T A C G C T A G C T G A T G C A A G T C G T C A A G T C C G T A A T C G C T A G A T C G
p-value:1e-22
log p-value:-5.279e+01
Information Content per bp:1.721
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.9 +/- 25.4bp
Average Position of motif in Background70.7 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCTRTGTTCCAGGCC
-YCTTTGTTCC-----
 T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCCTRTGTTCCAGGCC
----CTGTTCCTGG--
 T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCCTRTGTTCCAGGCC
-CCTTTGTTTT-----
 T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:CCCTRTGTTCCAGGCC-
---------CTAGGCCT
 T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCCTRTGTTCCAGGCC
TNNTCCTTTGTTCTNNT--
 A C G T A C G T A C G T T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCTRTGTTCCAGGCC--
-CTAAGGTTCTAGATCAC
 T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C A C G T A C G T
A C G T A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCCTRTGTTCCAGGCC
NNNTCCTTTGTTCTNNN--
 A C G T A C G T A C G T T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCCTRTGTTCCAGGCC
------GGTCCCGCCC
 T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCCTRTGTTCCAGGCC-
--BCNGGTTCTAGANCN
 T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C A C G T
A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

OLIG1/MA0826.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCCTRTGTTCCAGGCC
AACATATGTT-------
 A C G T T A G C A G T C A T G C A C G T C T A G C A G T T C A G A C G T A G C T A G T C A G T C G C T A C T A G A T C G T A G C A G T C
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T