Information for 4-GCAGAAGGCTTGA (Motif 7)

A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
Reverse Opposite:
C G A T T A G C C T G A C G T A C A T G A G T C A G T C C A G T A G C T A G T C A C G T C A T G T G A C
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.760
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif24.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets36.0 +/- 29.0bp
Average Position of motif in Background35.6 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCAGAAGGCTTGA
-----AAGCTTG-
 A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAAGGCTTGA
AACAGATGGC----
 A C G T A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCAGAAGGCTTGA-
TCAGNGAGCGTGAC
 A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

PROX1/MA0794.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCAGAAGGCTTGA
TAAGGCGTCTTG-
 A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCAGAAGGCTTGA
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGAAGGCTTGA
CCAGACRSVB---
 A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAGAAGGCTTGA
AACAGATGGT----
 A C G T A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCAGAAGGCTTGA
CCAGACAG-----
 A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GCAGAAGGCTTGA
TATCATTAGAACGCT---
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCAGAAGGCTTGA
DCTCAGCAGG-----
 A C G T A C G T A C T G G A T C C G T A A C T G C T G A G T C A T C A G A C T G G A T C A C G T A G C T A C T G C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T