Information for 4-CCTCTCTGGGTGGTTC (Motif 6)

G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C
Reverse Opposite:
A T C G C G T A T C G A G T A C T A G C G T C A G T A C G T A C G T A C G T C A T A C G G T C A T C A G C T G A A T C G A C T G
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.608
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.55%
Number of Background Sequences with motif100.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets51.5 +/- 27.6bp
Average Position of motif in Background51.5 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCTCTCTGGGTGGTTC
----CGTGGGTGGTCC
 G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C
A C G T A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCTCTCTGGGTGGTTC----
-----CTGATTGGTCNATTT
 G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTCTCTGGGTGGTTC-
AGAGTGCTGATTGGTCCA
 A C G T G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCTCTCTGGGTGGTTC
----CTTGAGTGGCT-
 G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CCTCTCTGGGTGGTTC--
------TGATTGGCTANN
 G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCTCTCTGGGTGGTTC
-----TTGATTGN---
 G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCTCTCTGGGTGGTTC---
--GTATTGGGTGGGTAATT
 G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C A C G T A C G T A C G T
A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTCTCTGGGTGGTTC
-GTCTGTGGTTT----
 G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCTCTCTGGGTGGTTC-
-----NTCGGTGGTCGC
 G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCTCTCTGGGTGGTTC
-----CCGATTGGCT-
 G T A C A T G C G A C T A G T C C A G T A G T C A C G T A C T G C A T G A C T G A C G T A T C G A C T G A G C T G C A T A T G C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T