Information for 2-AGCACCYKCAGGTCTC (Motif 3)

C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C
Reverse Opposite:
C T A G C T G A A C T G C G T A A T G C A G T C A G C T A C T G G T A C C T A G A T C G A C T G G A C T A T C G A G T C A G C T
p-value:1e-12
log p-value:-2.846e+01
Information Content per bp:1.693
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.4 +/- 21.0bp
Average Position of motif in Background55.5 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCACCYKCAGGTCTC
--CCCCCTTGGGCCCC
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C
A C G T A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.55
Offset:9
Orientation:forward strand
Alignment:AGCACCYKCAGGTCTC-----
---------AGGTCTCTAACC
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AGCACCYKCAGGTCTC
------AACAGGTGT-
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AGCACCYKCAGGTCTC-
-----SDGCAGGTGCNS
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.52
Offset:9
Orientation:forward strand
Alignment:AGCACCYKCAGGTCTC
---------AGGTCA-
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AGCACCYKCAGGTCTC
------NNCAGGTGNN
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AGCACCYKCAGGTCTC
------GACAGGTGTN
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AGCACCYKCAGGTCTC
------NNCAGGTGTN
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AGCACCYKCAGGTCTC-
-------VCAGGTRDRY
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGCACCYKCAGGTCTC
----ACTACAATTCCC
 C T G A T A C G A T G C C G T A G T A C A T G C G A T C C A T G A G T C T C G A A C T G A T C G C G A T A G T C A G C T A G T C
A C G T A C G T A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C