Information for 7-GCAAAATAGC (Motif 13)

C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C
Reverse Opposite:
A T C G G T A C A C G T C T G A A G C T G A C T C A G T C G A T A T C G G A T C
p-value:1e-5
log p-value:-1.292e+01
Information Content per bp:1.668
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif6.77%
Number of Background Sequences with motif867.9
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets40.6 +/- 23.8bp
Average Position of motif in Background48.1 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCAAAATAGC-
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCAAAATAGC
DCYAAAAATAGM
 A C G T A C G T C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAATAGC
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T A C G T C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAAAATAGC
CCAAAAATAG-
 A C G T C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCAAAATAGC
KCCAAAAATAGC
 A C G T A C G T C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCAAAATAGC
GCTAAAAATAGC
 A C G T A C G T C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCAAAATAGC---
-CAAGATGGCGGC
 C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAATAGC
TGGAAAA----
 A C G T C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCAAAATAGC
AATGGAAAAT---
 A C G T A C G T A C G T C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCAAAATAGC----
GCAAAACATTACTA
 C T A G T A G C G C T A G T C A C G T A T C G A G A C T T G C A C A T G T A G C A C G T A C G T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A