Information for 5-HGBGCGCCGCCGGGGA (Motif 11)

G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A
Reverse Opposite:
A C G T A T G C T A G C A G T C A T G C A C T G A C T G A T G C A C T G A T C G T A G C A T C G A T G C T G A C A T G C C T G A
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.741
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.0 +/- 24.6bp
Average Position of motif in Background46.5 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:HGBGCGCCGCCGGGGA--
---NCCCCCCCGGGGGGN
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:HGBGCGCCGCCGGGGA--
----CCCCCCCGGGGGNN
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:HGBGCGCCGCCGGGGA--
---ACCCCCCCGGGGGGN
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:HGBGCGCCGCCGGGGA--
---NCGCAGCGGGGGGTC
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:HGBGCGCCGCCGGGGA
--GGCCCCGCCCCC--
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:HGBGCGCCGCCGGGGA--
---DCHCAGCAGGRGGCC
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:HGBGCGCCGCCGGGGA--
---NCNCAGCGGGGGGTC
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:HGBGCGCCGCCGGGGA--
----CACAGCGGGGGGTC
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:HGBGCGCCGCCGGGGA
-CCACACAGCAGGAGA
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:HGBGCGCCGCCGGGGA
----NGTCCCNNGGGA
 G A C T T A C G A C G T A T C G A T G C A T C G A T G C G T A C A T C G A G T C G T A C T A C G A C T G A T C G A T C G G T C A
A C G T A C G T A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A