Information for 5-GGAGGCAATCCCT (Motif 8)

A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T
Reverse Opposite:
G C T A C T A G A C T G A C T G C T G A A G C T A C G T C A T G A G T C A G T C A C G T A G T C A G T C
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.807
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.3 +/- 23.6bp
Average Position of motif in Background42.2 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAGGCAATCCCT
GGGGGAATCCCC-
 A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGAGGCAATCCCT
---GGAAANCCCC
 A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGAGGCAATCCCT
---GGAAATCCCC
 A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGAGGCAATCCCT
---GGAAATTCCC
 A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAGGCAATCCCT
AGGGGAATCCCCT
 A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAGGCAATCCCT
AGATGCAATCCC-
 A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGAGGCAATCCCT-
--GGGAAATCCCCN
 A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCAATCCCT
GGGCGGGAAGG---
 A C G T A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGGCAATCCCT----
ATAGTTAATCCCCCNNA
 A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGCAATCCCT--
GNNAGCTAATCCCCCN
 A C G T A C T G A C T G C G T A A C T G A C T G G A T C G T C A T C G A G A C T A G T C A G T C A G T C C A G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T