Information for 2-GSACACAGCTGTCCCT (Motif 5)

C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
Reverse Opposite:
C G T A T C A G T C A G T A C G T G C A T G A C C G T A A T C G A T G C G C A T A T C G A C G T C T A G C G A T A T C G G T A C
p-value:1e-12
log p-value:-2.833e+01
Information Content per bp:1.581
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.34%
Number of Background Sequences with motif595.9
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets52.0 +/- 23.8bp
Average Position of motif in Background50.9 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GSACACAGCTGTCCCT
--ACAAAGGNBCCT--
C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GSACACAGCTGTCCCT
--ACAAAG--------
C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GSACACAGCTGTCCCT
AATCGCACTGCATTCCG-
A C G T A C G T C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GSACACAGCTGTCCCT
---CACAGN-------
C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GSACACAGCTGTCCCT
VRRACAAWGG-------
A C G T C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GSACACAGCTGTCCCT
GGAACAAAGR-------
A C G T C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GSACACAGCTGTCCCT
AAACAGACAAAGGAAT----
A C G T A C G T A C G T A C G T C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GSACACAGCTGTCCCT
----ACAGCTGTTV--
C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GSACACAGCTGTCCCT
---TGCAGCTGTCCCT
C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GSACACAGCTGTCCCT
----ACAGCTGTTN--
C A T G A T G C G C T A G A T C G T C A T A G C C G T A A T C G T A G C G C A T A C T G A C G T A T G C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T