Information for 1-AGCACGTCTC (Motif 4)

G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A T G C A C T G A C G T A C T G A G T C C G A T
p-value:1e-12
log p-value:-2.928e+01
Information Content per bp:1.857
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets55.5 +/- 25.0bp
Average Position of motif in Background35.6 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGCACGTCTC
-GCACGTAY-
 G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGCACGTCTC-
-GCACGTACCC
 G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Hes2/MA0616.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGCACGTCTC----
-GCACGTGTCNNNN
 G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGCACGTCTC
-GCACGTNC-
 G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGCACGTCTC
GGCACGTGNC
 G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGCACGTCTC
BGCACGTA--
 G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGCACGTCTC
GGCACGTGTC
 G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCACGTCTC
GGCACGTGTC
 G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCACGTCTC-
TGGCACGTGCCG
 A C G T G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C A C G T
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCACGTCTC
-GCACGTGT-
 G C T A A C T G A G T C T C G A G T A C T A C G A C G T A G T C A C G T A G T C
A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T