Information for 12-GCACACAGKCCAG (Motif 14)

C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
Reverse Opposite:
G T A C C G A T A C T G T A C G T G A C T A G C C G A T A C T G A G C T A C T G C G A T A T C G A G T C
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.700
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif148.8
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets60.8 +/- 23.5bp
Average Position of motif in Background50.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GCACACAGKCCAG
AGCGGCACACACGCAA-
 A C G T A C G T A C G T A C G T C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCACACAGKCCAG
CGAAGCACACAAAATA-
 A C G T A C G T A C G T A C G T C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCACACAGKCCAG
TBGCACGCAA-----
 A C G T A C G T C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCACACAGKCCAG
-CACGCA------
 C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCACACAGKCCAG
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCACACAGKCCAG
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCACACAGKCCAG
NNTTTGCACACGGCCC--
 A C G T A C G T A C G T A C G T A C G T C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCACACAGKCCAG
TTTGCACACGGCAC--
 A C G T A C G T A C G T C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCACACAGKCCAG
---CAAAGGTCAG
 C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GCACACAGKCCAG
TACATGTGCACATAAAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C C G T A A G T C T C G A T G A C C G T A A T C G A C T G A T G C T G A C C G T A A C T G
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T