Information for 6-TGCTCCATGGCTG (Motif 7)

C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C T G C T A G C G T A A C T G A G T C C G T A
p-value:1e-13
log p-value:-3.056e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 26.3bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGCTCCATGGCTG-
------TWGTCTGV
 C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCTCCATGGCTG
TGATTRATGGCY-
 C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCTCCATGGCTG
CCGCCCAAGGGCAG
 A C G T C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TGCTCCATGGCTG--
---------GCTGTG
 C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGCTCCATGGCTG
CNGTCCTCCC------
 A C G T A C G T A C G T C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCTCCATGGCTG-
GTCATGCHTGRCTGS
 A C G T C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCTCCATGGCTG
TGATTTATGGC--
 C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TGCTCCATGGCTG-
------CTGTCTGG
 C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCTCCATGGCTG
TGATTGATGA---
 C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGCTCCATGGCTG
--GTTAATGGCC-
 C G A T C T A G A G T C A C G T A G T C T A G C G T C A C G A T A C T G T C A G A G T C A C G T A C T G
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T