Information for 1-TGMAAACACARCYCYT (Motif 5)

C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
Reverse Opposite:
T C G A C T G A A C T G T C G A A C T G G A C T G A C T A C T G A C G T T A C G A C G T A C G T A G C T C A G T A T G C G T C A
p-value:1e-15
log p-value:-3.460e+01
Information Content per bp:1.553
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.06%
Number of Background Sequences with motif770.7
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets48.8 +/- 20.8bp
Average Position of motif in Background48.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGMAAACACARCYCYT
--AAACCACANN----
 C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGMAAACACARCYCYT
--AAACCACAGC----
 C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGMAAACACARCYCYT
-NAAACCACAG-----
 C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGMAAACACARCYCYT
--AAACCACAGAN---
 C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGMAAACACARCYCYT
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGMAAACACARCYCYT
-NWAACCACADNN---
 C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGMAAACACARCYCYT
GCAAAACATTACTA--
 C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGMAAACACARCYCYT
AAGTAAACAAA------
 A C G T C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGMAAACACARCYCYT
--AAATCACAGCA---
 C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------TGMAAACACARCYCYT
NNNVCTGWGYAAACASN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G G T C A C T G A T G C A T G C A A T G C G T C A T G A C C T G A C T G A T G A C A G C T T G A C G A C T A G C T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T