Information for 20-AGTTGTCCAACAG (Motif 31)

C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G
Reverse Opposite:
A T G C G C A T T C A G A G C T A G C T C A T G A T C G T G C A T G A C C T G A C T G A A G T C G A C T
p-value:1e-7
log p-value:-1.791e+01
Information Content per bp:1.658
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif428.9
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets50.1 +/- 21.2bp
Average Position of motif in Background50.9 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGTTGTCCAACAG
--TTTTCCA----
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGTTGTCCAACAG-----
---CGACCAACTGCCGTG
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGTTGTCCAACAG
-GTTGCGCAAT--
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGTTGTCCAACAG---
------CCAACTGCCA
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGTTGTCCAACAG
NATTGTGCAAT--
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGTTGTCCAACAG
-ATTTTCCATT--
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGTTGTCCAACAG---------
---TGGCCACCAGGGGGCGCTA
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGTTGTCCAACAG----
----ATGCAACAGGTGG
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGTTGTCCAACAG------
---CGACCAACTGCCATGC
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGTTGTCCAACAG----------
---TGGCCACCAGGTGGCACTNT
 C T G A T A C G G A C T A G C T A C T G A C G T A T G C G A T C C T G A T C G A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T