Information for 3-MCARTGTTTCTTYCAG (Motif 22)

G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
Reverse Opposite:
G T A C A C G T C T A G T C G A G T C A C T G A A T C G C G T A C G T A C G T A A G T C C T G A G A T C A C G T A C T G C A T G
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.732
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.4 +/- 24.6bp
Average Position of motif in Background41.6 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:MCARTGTTTCTTYCAG
-GAATGTTTGTTT---
 G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:MCARTGTTTCTTYCAG
-TATTGTTTATT----
 G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:MCARTGTTTCTTYCAG
----TGTTTATTT---
 G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:MCARTGTTTCTTYCAG
CCATTGTTYB------
 G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MCARTGTTTCTTYCAG
CCATTGTTC-------
 G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MCARTGTTTCTTYCAG
CCATTGTTTT------
 G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-MCARTGTTTCTTYCAG
NCCATTGTTY-------
 A C G T G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:MCARTGTTTCTTYCAG
--ATTGTTA-------
 G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---MCARTGTTTCTTYCAG
GHWACAWTGTWDCWA----
 A C G T A C G T A C G T G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----MCARTGTTTCTTYCAG
YDGHTACAWTGTADC------
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C C G T A C T A G A G C T T C A G C G A T A C G T A C G T A T G C A G C T A C G T A G C T A G T C T C G A A C T G
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T