Information for 2-DGGAAATTCC (Motif 2)

C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C
Reverse Opposite:
A C T G A C T G G C T A C G T A G C A T A C G T A C G T A T G C G T A C G C T A
p-value:1e-17
log p-value:-3.946e+01
Information Content per bp:1.630
Number of Target Sequences with motif150.0
Percentage of Target Sequences with motif17.16%
Number of Background Sequences with motif3886.2
Percentage of Background Sequences with motif8.17%
Average Position of motif in Targets48.0 +/- 27.0bp
Average Position of motif in Background49.9 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:DGGAAATTCC-
-GGAAATTCCC
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:DGGAAATTCC-
-GGAAATTCCC
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:DGGAAATTCC-
-GGAAANCCCC
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:DGGAAATTCC-
-GGAAATCCCC
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:DGGAAATTCC--
GGGAAATCCCCN
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.79
Offset:2
Orientation:forward strand
Alignment:DGGAAATTCC--
--CACATTCCAT
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T A C G T
A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:DGGAAATTCC---
---RCATTCCWGG
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.77
Offset:3
Orientation:forward strand
Alignment:DGGAAATTCC-
---ACATTCCA
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:DGGAAATTCC---
---GCATTCCAGN
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.75
Offset:2
Orientation:forward strand
Alignment:DGGAAATTCC--
--CACATTCCAT
 C G A T C A T G A T C G T G C A G T C A C G T A G C A T C G A T A G T C G T A C A C G T A C G T
A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T