Information for 9-AAACCAAACC (Motif 19)

C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C
Reverse Opposite:
C A T G C A T G A C G T G C A T G A C T A T C G A T C G C A G T G A C T C G A T
p-value:1e-6
log p-value:-1.488e+01
Information Content per bp:1.650
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1404.1
Percentage of Background Sequences with motif2.94%
Average Position of motif in Targets59.6 +/- 26.5bp
Average Position of motif in Background50.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0035.1_Irf5_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAACCAAACC--
ATAAACCGAAACCAA
 A C G T A C G T A C G T C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAACCAAACC
AAACCACANN
 C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAACCAAACC--
CAAAATCGAAACTAA
 A C G T A C G T A C G T C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAACCAAACC-
GAGAACCGAAACTG
 A C G T A C G T A C G T C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAACCAAACC-
TCGAAACCGAAACT
 A C G T A C G T A C G T C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAACCAAACC
NAAACCACAG-
 A C G T C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAACCAAACC
AAACCACAGC
 C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAACCAAACC---
CGTATCGAAACCAAA
 A C G T A C G T C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

IRF9/MA0653.1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AAACCAAACC-
AACGAAACCGAAACT
 A C G T A C G T A C G T A C G T C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAACCAAACC-----
CTGATCGAAACCAAAGT
 A C G T A C G T C G T A C T G A G T C A T A G C T A G C C T G A C G T A T G C A G T A C G T A C A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T