Information for 14-YAAATATATT (Motif 27)

G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T
Reverse Opposite:
G T C A C G T A A C G T C G T A A C G T G T C A A C G T A C G T A C G T C T G A
p-value:1e-6
log p-value:-1.427e+01
Information Content per bp:1.823
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif239.7
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets47.5 +/- 27.8bp
Average Position of motif in Background48.9 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:YAAATATATT--
-AAGGATATNTN
 G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YAAATATATT-
-TAATCAATTA
 G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T A C G T
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

PAX3/MA0780.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YAAATATATT-
-TAATCGATTA
 G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T A C G T
A C G T C G A T T C G A G T C A A G C T A G T C T C A G C T G A A C G T G A C T G C T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:YAAATATATT--
TAATTNVATTAN
 G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T A C G T A C G T
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----YAAATATATT
TATGTAAATAT---
 A C G T A C G T A C G T A C G T G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--YAAATATATT----
TCTTTATATATAAATA
 A C G T A C G T G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:YAAATATATT
CAAATCACTG
 G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:YAAATATATT----
AAAAACCATTAAGG
 G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--YAAATATATT--
AAAAAATCGATAAT
 A C G T A C G T G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-YAAATATATT
HNRAATCAAT-
 A C G T G A C T C G T A C G T A C G T A A C G T G T C A A C G T G T C A A C G T A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T