Information for 8-CTRTMWTTSAGGC (Motif 16)

A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T T A G C C G T A C G T A C G A T A C T G C G T A A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.183e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 31.7bp
Average Position of motif in Background71.6 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTRTMWTTSAGGC
GSCTGTCACTCA---
 A C G T A C G T A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTRTMWTTSAGGC
NCTGTCAATCAN--
 A C G T A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTRTMWTTSAGGC
SCTGTCAVTCAV--
 A C G T A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTRTMWTTSAGGC----
---ACATTCATGACACG
 A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PH0175.1_Vax2/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTRTMWTTSAGGC
GTGCACTAATTAAGAC
 A C G T A C G T A C G T A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CTRTMWTTSAGGC----
---------AGGCCTNG
 A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CTRTMWTTSAGGC---------
--------CAGGCCNNGGCCNN
 A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CTRTMWTTSAGGC
--GTAATTAA---
 A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C
A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTRTMWTTSAGGC
-GCTATTTTTGGM
 A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------CTRTMWTTSAGGC
NNNCAGCTGTCAATATN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T T C A G A C G T G T A C G C T A A C G T A C G T A T C G C G T A A C T G A C T G A G T C
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T