Information for 4-CGCASCTGGCMGSGCC (Motif 15)

A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
Reverse Opposite:
A C T G A C T G G T A C A T G C A G T C A C G T C T A G A T G C A T G C G T C A A C T G A T C G A C G T A C T G A G T C C T A G
p-value:1e-9
log p-value:-2.228e+01
Information Content per bp:1.789
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets29.5 +/- 18.6bp
Average Position of motif in Background56.4 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF4/MA0830.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCASCTGGCMGSGCC
CGCACCTGCT------
 A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCASCTGGCMGSGCC
CGCAGCTGCG------
 A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCASCTGGCMGSGCC
NVCAGCTGBBNN----
 A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCASCTGGCMGSGCC
TACACCTGTC------
 A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGCASCTGGCMGSGCC
NNGCAGCTGTC------
 A C G T A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGCASCTGGCMGSGCC
NNTNCGCACCTGTNGAN---
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCASCTGGCMGSGCC
AACACCTGCT------
 A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCASCTGGCMGSGCC
NNACAGCTGC-------
 A C G T A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCASCTGGCMGSGCC
TGCAGCTGTCCCT---
 A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCASCTGGCMGSGCC
-VCAGCTGBNN-----
 A G T C A C T G A G T C C G T A T A G C A G T C A C G T A T C G A T C G A G T C G T C A A C T G T A C G A C T G T A G C A G T C
A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T