Information for 1-ATTTAAGGGGCCA (Motif 1)

T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A
Reverse Opposite:
A C G T A C T G C T A G G A T C A G T C A G T C A G T C A C G T C G A T C G T A G T C A C G T A A C G T
p-value:1e-13
log p-value:-3.145e+01
Information Content per bp:1.746
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.0 +/- 21.6bp
Average Position of motif in Background47.3 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATTTAAGGGGCCA-----
-GGCGAGGGGTCAAGGGC
 T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATTTAAGGGGCCA-----
-NTNNNGGGGTCANGNNN
 T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATTTAAGGGGCCA
--TTAAGTGGN--
 T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATTTAAGGGGCCA
--TTAAGTGGT--
 T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTTAAGGGGCCA--
NTNNTTAAGTGGNTNAN
 A C G T A C G T T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PB0184.1_Tbp_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATTTAAGGGGCCA
CCGATTTAAGCGACC-
 A C G T A C G T A C G T T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTTAAGGGGCCA
--TTGAGTGSTT-
 T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATTTAAGGGGCCA
-TTTAATTGCN--
 T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATTTAAGGGGCCA
-TGTCAGGGGGCG
 T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATTTAAGGGGCCA-----
-CTCCAGGGGTCAATTGA
 T C G A C G A T A C G T A C G T G C T A C G T A C T A G C T A G C T A G C T A G A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A