Information for 4-GCGGAGTCGCGTG (Motif 5)

T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G
Reverse Opposite:
A G T C C T G A A T G C A T C G A G T C A C T G C T G A A G T C A G C T A G T C A G T C A C T G A G T C
p-value:1e-11
log p-value:-2.676e+01
Information Content per bp:1.783
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif69.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets42.5 +/- 25.0bp
Average Position of motif in Background54.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:GCGGAGTCGCGTG--
-----NNCGCGTGNN
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCGGAGTCGCGTG----
---NNGTCGCGTGNCAC
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

TFE3/MA0831.1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GCGGAGTCGCGTG--
-----GTCACGTGNT
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCGGAGTCGCGTG-
----GGTCACGTGC
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G A C G T
A C G T A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.65
Offset:7
Orientation:forward strand
Alignment:GCGGAGTCGCGTG
-------TGCGTG
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GCGGAGTCGCGTG--
-----GGCACGTGTC
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GCGGAGTCGCGTG--
-----GACACGTGCC
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GCGGAGTCGCGTG--
-----GTCACGTGGT
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GCGGAGTCGCGTG
-----GHCACGTG
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GCGGAGTCGCGTG--
-----GTCACGTGAT
 T A C G A G T C C T A G T A C G C T G A C T A G G A C T G T A C C T A G A T G C A T C G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T