p-value: | 1e-8 |
log p-value: | -1.959e+01 |
Information Content per bp: | 1.857 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.31% |
Number of Background Sequences with motif | 56.4 |
Percentage of Background Sequences with motif | 0.12% |
Average Position of motif in Targets | 50.1 +/- 30.8bp |
Average Position of motif in Background | 43.0 +/- 25.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTAAGGGCC TTTAATTGCN- |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTAAGGGCC DGWTTTATGRCN- |
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TATA-Box(TBP)/Promoter/Homer
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTTAAGGGCC CCTTTTATAGNC- |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTAAGGGCC TTTTATTRGN- |
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PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTAAGGGCC- GGTTAGAGACCT |
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HOXB13/MA0901.1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTAAGGGCC NTTTTATTGG-- |
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PH0056.1_Hoxa9/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TTTAAGGGCC-- ANTAATTTTATGGCCGN |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTTAAGGGCC NTGATTTATGGCC- |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTAAGGGCC NTTTTACGAGN- |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTAAGGGCC TGATTTATGGCC- |
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