Information for 1-GVCCACGTGG (Motif 1)

T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G
Reverse Opposite:
A T G C A G T C C G T A A G T C A C T G A C G T A C T G T A C G A T C G A T G C
p-value:1e-119
log p-value:-2.749e+02
Information Content per bp:1.759
Number of Target Sequences with motif269.0
Percentage of Target Sequences with motif29.27%
Number of Background Sequences with motif2393.3
Percentage of Background Sequences with motif5.27%
Average Position of motif in Targets52.7 +/- 25.0bp
Average Position of motif in Background47.9 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:GVCCACGTGG
NNCCACGTGG
 T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:GVCCACGTGG
NNCCACGTGG
 T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.97
Offset:3
Orientation:reverse strand
Alignment:GVCCACGTGG-
---CACGTGGN
 T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G A C G T
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.97
Offset:3
Orientation:reverse strand
Alignment:GVCCACGTGG-
---CACGTGGC
 T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G A C G T
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-GVCCACGTGG-
NNACCACGTGGT
 A C G T T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G A C G T
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T

MAX/MA0058.3/Jaspar

Match Rank:6
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:GVCCACGTGG-
-NNCACGTGGT
 T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G A C G T
A C G T C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:GVCCACGTGG-
---CACGTGBN
 T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G A C G T
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

MNT/MA0825.1/Jaspar

Match Rank:8
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:GVCCACGTGG-
-NGCACGTGNT
 T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G A C G T
A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.94
Offset:1
Orientation:forward strand
Alignment:GVCCACGTGG
-GNCACGTG-
 T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GVCCACGTGG
GGTCACGTGA
 T A C G T A G C A T G C A G T C C G T A A G T C A C T G C G A T A C T G T A C G
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A