Information for 1-WCSCYYTCAAGKCCMT (Motif 2)

G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T
Reverse Opposite:
C G T A C A T G A C T G A C T G G T A C A G T C A G C T A C G T A C T G G T C A C T G A C T A G C T A G A T C G A C T G C G T A
p-value:1e-12
log p-value:-2.881e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.1 +/- 15.2bp
Average Position of motif in Background59.0 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:WCSCYYTCAAGKCCMT
-----NTCAAGGTCA-
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:WCSCYYTCAAGKCCMT
-----TTCAAGGTCAT
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:WCSCYYTCAAGKCCMT
-----BTCAAGGTCA-
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:WCSCYYTCAAGKCCMT-
------TCAAGGTCATA
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.62
Offset:7
Orientation:forward strand
Alignment:WCSCYYTCAAGKCCMT-
-------CAAGGHCANV
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:WCSCYYTCAAGKCCMT-
--AAGTTCAAGGTCAGC
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T A C G T
A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:WCSCYYTCAAGKCCMT
------TCAAGGTCAT
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:WCSCYYTCAAGKCCMT----
---TATTCAAGGTCATGCGA
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WCSCYYTCAAGKCCMT
AGCCACTCAAG-----
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:WCSCYYTCAAGKCCMT
------TCAAGGTCAN
 G C A T A G T C A T G C A G T C A G T C A G C T A C G T A G T C C G T A C T G A A C T G A C T G G T A C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C