NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_Cancer_RAD21_SRX957149	number of peaks	38526
antibody	RAD21
cell line	HELA	Number of reads	52836953
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	1900
CTCF	1857
MYC	1797
MYCN	1757
TCF4	1342
ZNF740	1296
TAL1::TCF3	1288
Tcf12	1206
E2F1	1155
NR2F1	1077
TFAP2A	1075
TFAP2A-var.2	1044
TCF3	976
EGR1	950
ZEB1	945
TFAP2C	920
MAX	907
ZBTB7A	788
E2F4	761
NFIC	721
ERG	655
EGR2	651
MAX::MYC	633
Esrrg	605
Gabpa	572
BHLHE41	556
RUNX1	537
ELF1	521
Sox2	501
ZNF263	500
MYBL1	499
KLF4	475
TFAP2A-var.3	459
NRF1	420
NFKB1	400
E2F6	396
Ar	395
FOXA1	379
KLF5	377
ELK1	363
EBF1	358
STAT3	353
Esrra	342
TFAP4	340
NEUROD1	322
BHLHE40	316
Pparg::Rxra	302
Rxra	298
USF1	295
Klf1	292
KLF9	290
USF2	284
FOS	280
Hnf4a	277
NR1H2::RXRA	277
YY1	276
REL	271
Tcf21	270
TEAD4	270
SP3	269
RUNX3	269
ETS1	252
ETV1	242
Gata1	238
FLI1	236
Foxa2	231
RELA	225
TFDP1	223
THAP1	223
PBX1	208
SPI1	200
TEAD1	193
BATF::JUN	187
Gata4	187
NFKB2	185
JUND	184
HEY1	183
FOSL2	183
OTX2	183
CEBPB	182
GATA3	179
Arnt	178
NFIA	175
FOSL1	170
SNAI2	169
PAX5	161
GATA2	161
STAT1::STAT2	159
SMAD2::SMAD3::SMAD4	156
JUN	153
ELK4	152
E2F3	150
Atf3	147
Hand1::Tcf3	145
ARNT::HIF1A	142
ELF3	138
POU5F1B	136
FOS::JUN	130
SP4	129
NFATC3	128
GATA5	123
EGR4	123
ETV6	121
SOX9	121
TCF7L2	115
CEBPA	112
TP63	112
ELK3	107
ETV3	106
Nr1h3::Rxra	104
MYB	102
SP2	101
Tcf7	99
CREB1	97
CEBPD	94
RUNX2	90
HSF1	89
Hic1;	87
Ahr::Arnt	86
ERF	83
HNF4G	82
EOMES	76
MAFK	76
Atf1	75
RARA::RXRA	73
Pou5f1::Sox2	73
TEAD2	72
FEV	71
NR3C2	69
Bach1::Mafk	68
Mafb	64
HINFP	64
JUNB	61
NFE2	61
MAF::NFE2	58
KLF13	57
Foxj2	56
Nfe2l2	55
STAT1	55
BCL6B	54
GATA1::TAL1	53
EGR3	53
MAFG	53
Foxo1	52
NKX3-2	51
MAFF	50
SCRT1	49
XBP1	48
Bcl6	47
Stat5a::Stat5b	45
BATF3	45
NR4A2	43
MEF2B	41
FOXH1	41
SPIB	41
Arntl	40
Dux	39
ZNF143	36
TP53	35
REST	34
ATF4	32
NFYB	31
Arid3a	30
Ddit3::Cebpa	29
Rarg	28
NFYA	28
CDX2	28
Gfi1b	28
FOXP1	28
PRDM1	27
PDX1	26
DUX4	26
Gmeb1	26
MYBL2	26
TP73	25
RXRB	25
RXRG	24
ZBTB18	24
GMEB2	24
TBX1	23
IRF1	22
NR2C2	22
Vdr	21
SRF	20
NFATC1	20
NFIL3	19
GLI2	18
Rarb	17
POU2F2	17
Sox17	16
ETV4	15
ELF5	15
CLOCK	14
FOXP3	14
PPARG	14
SREBF1	14
ZBTB33	13
MEF2A	13
HNF1B	11
SREBF2	11
NR3C1	11
CREB3L1	11
Nkx3-1	10
LEF1	10
RFX5	10
GRHL1	10
Ascl2	9
Nr5a2	8
Mecom	8
Srebf1(var.2)	7
RARA	7
MAFG::NFE2L1	6
TBX19	6
RXRA::VDR	6
RORA(var.2)	6
MEF2D	5
BARX1	5
SMAD3	4
Id2	4
RORA	4
Pax6	4
NKX2-3	3
HNF1A	3
Hes1	3
Pitx1	2
PROX1	2
Creb3l2	2
MEIS1	2
ISX	2
FOS::JUND	2
HOXA13	1
MTF1	1
Stat4	1
Alx4	1
IRF2	1
POU3F2	1
HES5	1
Hoxa11	1
Myod1	1
Arx	1
Tcfl5	1
NFIC::TLX1	1
FOS::JUNB	1
CREB3	1

Motif name

Number of overlap

1900

1857

1797

1757

1342