NAIK Genome Database

experiment name	hs_ProstateCancer_VCaP_cancer_HDAC1_SRX059710	number of peaks	19586
antibody	HDAC1
cell line	VCAP	Number of reads	25979942
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
MYCN	1168
MYC	988
E2F1	902
SP1	773
TFAP2A-var.2	761
TAL1::TCF3	759
ZNF740	753
MAX	711
TFAP2A	695
EGR1	684
TCF4	683
ZBTB7A	633
NR2F1	617
TCF3	587
Tcf12	551
ZEB1	542
FOXA1	524
MAX::MYC	481
ERG	471
TFAP2C	470
Ar	436
Esrrg	417
E2F4	398
Foxa2	390
Gabpa	359
TFAP2A-var.3	350
EGR2	345
ELF1	340
NFKB1	331
E2F6	328
Sox2	293
HEY1	286
CTCF	282
BHLHE40	277
NRF1	276
TFDP1	275
RUNX1	269
MYBL1	262
ZNF263	258
KLF4	249
EBF1	245
NFIC	244
BHLHE41	242
STAT3	237
YY1	233
Esrra	225
REL	210
ETS1	210
USF2	198
ELK1	189
KLF9	176
NFKB2	175
Pparg::Rxra	172
Rxra	169
Hnf4a	168
Klf1	161
SNAI2	153
RELA	153
KLF5	151
ETV1	151
TEAD4	147
SP3	144
Arnt	143
GATA3	140
OTX2	135
USF1	134
FEV	129
Gata1	129
FOS	128
RUNX3	125
FLI1	124
NR1H2::RXRA	123
NEUROD1	122
GATA2	108
NR3C2	106
POU5F1B	105
SOX9	105
STAT1::STAT2	102
TFAP4	101
Tcf21	100
Hand1::Tcf3	99
TEAD1	98
NFATC3	98
SMAD2::SMAD3::SMAD4	97
GATA5	93
PBX1	92
SPI1	87
ARNT::HIF1A	86
Gata4	84
PAX5	83
ELK4	82
FOSL2	81
JUND	80
NFIA	79
ELF3	78
BATF::JUN	77
THAP1	74
TCF7L2	72
EGR4	72
SPIB	72
ERF	70
JUN	68
Ahr::Arnt	66
NKX3-2	65
FOSL1	65
ETV3	64
Foxj2	64
Tcf7	64
CEBPB	64
ELK3	61
NR4A2	59
FOS::JUN	58
CREB1	57
Foxo1	56
Atf3	56
TP63	56
CEBPA	55
ETV6	53
MYB	49
Stat5a::Stat5b	49
HNF4G	48
CEBPD	47
E2F3	47
Mafb	45
Nkx3-1	43
GATA1::TAL1	42
Gmeb1	40
Hic1;	39
RARA::RXRA	39
HSF1	39
Atf1	39
MYBL2	38
STAT1	37
RUNX2	36
Bcl6	35
NFE2	35
BCL6B	35
CDX2	35
Nfe2l2	34
Pou5f1::Sox2	31
HINFP	31
Nr1h3::Rxra	29
FOXP1	28
MAFK	28
REST	28
PDX1	28
EGR3	28
CREB3L1	27
MEF2B	26
Bach1::Mafk	26
Arntl	26
TEAD2	25
KLF13	25
MAF::NFE2	25
GMEB2	25
Arid3a	25
ZNF143	24
BATF3	23
RXRB	22
SP2	21
NR2C2	21
RXRG	21
MAFF	21
EOMES	20
PRDM1	20
MAFG	19
NFIL3	19
ZBTB33	18
FOXH1	18
GLI2	17
TP53	17
NR3C1	17
SP4	16
Gfi1b	15
Mecom	15
POU2F2	15
XBP1	15
NFYB	14
Rarg	14
IRF1	13
SRF	13
JUNB	13
Vdr	13
TP73	12
FOXP3	12
SCRT1	12
RFX5	11
TBX1	11
ETV4	11
Ddit3::Cebpa	10
ATF4	10
BARX1	8
MEF2A	8
NFYA	8
CLOCK	8
Dux	8
CREB3	8
LEF1	7
RXRA::VDR	7
Pax6	7
ZBTB18	6
GRHL1	6
Creb3l2	6
SREBF2	6
HNF1B	6
Sox17	6
PPARG	6
NFATC1	5
TBX19	4
Ascl2	4
HES5	4
ELF5	4
Klf12	4
Rarb	4
Hes1	4
MAFG::NFE2L1	4
Nr5a2	3
NKX2-3	3
HOXA13	3
HNF1A	3
PROX1	3
RORA(var.2)	3
DUX4	3
MEF2D	3
Srebf1(var.2)	3
SREBF1	3
Rfx1	2
Id2	2
Hoxa11	2
RORA	2
FOXO4	2
SMAD3	2
MIXL1	2
Pitx1	2
RFX2	1
Arx	1
ISX	1
Alx4	1
HOXB13	1
SREBF2(var.2)	1
POU3F2	1
Nkx2-5-var.2	1
DBP	1
IRF2	1
Stat4	1
HOXA5	1
HSF2	1

Motif name

Number of overlap

1168

988

902

773

761