Information for 2-VCCACGTGSYNNB (Motif 2)

T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
Reverse Opposite:
T A C G T A C G C G T A T C G A T A G C A G T C C G T A A G T C C T A G C G A T A C T G A T C G A G C T
p-value:1e-77
log p-value:-1.791e+02
Information Content per bp:1.600
Number of Target Sequences with motif181.0
Percentage of Target Sequences with motif20.62%
Number of Background Sequences with motif1649.9
Percentage of Background Sequences with motif3.71%
Average Position of motif in Targets53.6 +/- 18.5bp
Average Position of motif in Background49.9 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:VCCACGTGSYNNB
ACCACGTGGTNN-
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:VCCACGTGSYNNB
-CCACGTGGNN--
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:VCCACGTGSYNNB
-CCACGTGGNN--
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:4
Score:0.95
Offset:0
Orientation:forward strand
Alignment:VCCACGTGSYNNB
ACCACGTGCT---
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:VCCACGTGSYNNB
--CACGTGBN---
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:6
Score:0.93
Offset:0
Orientation:forward strand
Alignment:VCCACGTGSYNNB
ACCACGTGCC---
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:forward strand
Alignment:VCCACGTGSYNNB
GCCACGTG-----
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.93
Offset:1
Orientation:forward strand
Alignment:VCCACGTGSYNNB
-CCATGTGCTT--
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.93
Offset:0
Orientation:forward strand
Alignment:VCCACGTGSYNNB
GNCACGTG-----
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:VCCACGTGSYNNB
--CACGTGNT---
 T C G A T A G C A G T C C G T A A G T C T C A G A C G T A C T G A T C G A G C T G C A T A T G C A T G C
A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T