p-value: | 1e-8 |
log p-value: | -1.890e+01 |
Information Content per bp: | 1.899 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.46% |
Number of Background Sequences with motif | 0.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 49.8 +/- 28.0bp |
Average Position of motif in Background | 55.7 +/- 9.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.77 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTGGCAATTTGCC-- CTTGGCANNNTGCCAA |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCAATTTGCC- CTGGCAGNCTGCCA |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGGCAATTTGCC- TTGGCATGGTGCCA |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGGCAATTTGCC CTTGGCAA------ |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGCAATTTGCC TTGGCA------- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGGCAATTTGCC NTTGGCANN----- |
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NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CTGGCAATTTGCC --GGGAATTTCC- |
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NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGGCAATTTGCC -NGGGGATTTCCC |
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RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTGGCAATTTGCC- CAKCTGKYCYYTTYCCC |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CTGGCAATTTGCC-- ----NNACTTGCCTT |
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