Information for 11-ACAAGTACAA (Motif 18)

G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A
Reverse Opposite:
A G C T A C G T C A T G C G A T C G T A T A G C A G C T A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.843
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif42.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets58.7 +/- 22.8bp
Average Position of motif in Background49.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTACAA--
AATATACATGTAAAACA
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTACAA--
AATATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTACAA--
AAAATACATGTAATACT
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTACAA--
AAAATACATGTAAAAAT
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ACAAGTACAA
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTACAA--
AATATACATGTAATATA
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACAAGTACAA-
-CAAGGHCANV
 G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGTACAA--
TAAATACATGTAAAATT
 A C G T A C G T A C G T A C G T A C G T G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACAAGTACAA---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACAAGTACAA
CCAATTAA--
 G T C A T G A C C G T A C T G A A T C G A C G T C G T A G A T C C G T A C T G A
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T