p-value: | 1e-8 |
log p-value: | -1.929e+01 |
Information Content per bp: | 1.940 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.59% |
Number of Background Sequences with motif | 2.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.4 +/- 15.5bp |
Average Position of motif in Background | 17.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CGATCCGCAGCAG---- -----CACAGCAGGGGG |
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NHLH1/MA0048.2/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CGATCCGCAGCAG-- -----CGCAGCTGCG |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGATCCGCAGCAG---- --CCACACAGCAGGAGA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGATCCGCAGCAG---- --CCACACAGCAGGAGA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGATCCGCAGCAG---- --GAGCACAGCAGGACA |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CGATCCGCAGCAG------ ----DCHCAGCAGGRGGCC |
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Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CGATCCGCAGCAG--- ------NCAGCTGCTG |
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SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CGATCCGCAGCAG -----ANCAGCTG |
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Myog/MA0500.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CGATCCGCAGCAG-- ----NNGCAGCTGTC |
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PB0003.1_Ascl2_1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGATCCGCAGCAG----- -NNNNAGCAGCTGCTGAN |
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