Information for 9-AAGCTCAGGGACACAC (Motif 8)

G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C
Reverse Opposite:
A T C G A C G T A T C G C G A T A C T G A G C T A T G C G T A C A G T C A C G T A T C G C G T A A T C G G T A C A C G T A C G T
p-value:1e-12
log p-value:-2.811e+01
Information Content per bp:1.793
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 15.7bp
Average Position of motif in Background52.1 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGCTCAGGGACACAC
-AGGTCAAGGTCA---
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGCTCAGGGACACAC
-AGGTCAAGGTCA---
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGCTCAGGGACACAC
AAGTTCAAGGTCAGC-
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAGCTCAGGGACACAC
----TGAGTGACAGSC
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AAGCTCAGGGACACAC-
-----AGGTGHCAGACA
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AAGCTCAGGGACACAC
---BTGABTGACAGS-
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AAGCTCAGGGACACAC
---NTGATTGACAGN-
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAGCTCAGGGACACAC
----CCAGGAACAG--
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAGCTCAGGGACACAC----
----AGCGGCACACACGCAA
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AAGCTCAGGGACACAC
------TGGGGCCCAC
 G T C A C G T A A C T G A T G C C G A T A T G C C G T A A C T G A C T G A T C G C T G A A G T C C G T A A T G C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C