Information for 18-CCYGTACTGGAAA (Motif 28)

A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A
Reverse Opposite:
A G C T C G A T A C G T A G T C G T A C T C G A A C T G A C G T G T C A G T A C C T A G A C T G T A C G
p-value:1e-5
log p-value:-1.342e+01
Information Content per bp:1.733
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif87.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets58.8 +/- 26.4bp
Average Position of motif in Background47.5 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCYGTACTGGAAA-
--TTTCCNGGAAAN
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A A C G T
A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCYGTACTGGAAA-
NNCTTCCNGGAAGN
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCYGTACTGGAAA----
--TTTCCTGGAAAGNNN
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCYGTACTGGAAA
--TTTCCTGGAAA
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A
A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCYGTACTGGAAA
--CTTCCNGGAA-
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A
A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCYGTACTGGAAA-
NATTTCCNGGAAAT
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CCYGTACTGGAAA
-----ACCGGAAG
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G

FLI1/MA0475.2/Jaspar

Match Rank:8
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CCYGTACTGGAAA--
-----ACCGGAAGTG
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T T C A G

ETS1/MA0098.3/Jaspar

Match Rank:9
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CCYGTACTGGAAA--
-----ACCGGAAGTG
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C A T C G A C T G C G T A C G T A T C A G A G C T T C A G

ERG/MA0474.2/Jaspar

Match Rank:10
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CCYGTACTGGAAA--
-----ACCGGAAGTG
 A G T C G T A C A G T C C A T G A C G T G T C A A G T C A G C T A C T G C T A G C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T G A C C T A G A C T G G T C A G C T A T C A G A G C T T A C G