Information for 10-TCAGTTTGAT (Motif 27)

G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T
Reverse Opposite:
C T G A A C G T G T A C C T G A G T C A G T C A A T G C A G C T C T A G C G T A
p-value:1e-5
log p-value:-1.369e+01
Information Content per bp:1.736
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif354.5
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets42.9 +/- 21.7bp
Average Position of motif in Background47.5 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TCAGTTTGAT
----TTTAAT
 G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTTTGAT------
NNNNNATTGATGNGTGN
 A C G T G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PH0016.1_Cux1_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCAGTTTGAT-------
ACCGGTTGATCACCTGA
 G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCAGTTTGAT----
----ATTGATTYND
 G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCAGTTTGAT--
TTTGATTGATGN
 G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCAGTTTGAT-----
NNTTCCTTTGATCTANA
 A C G T A C G T G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCAGTTTGAT----
--TGATTTATGGCC
 G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCAGTTTGAT-----
AATCCCTTTGATCTATC
 A C G T A C G T G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCAGTTTGAT-----
ATTTCCTTTGATCTATA
 A C G T A C G T G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCAGTTTGAT---
--TGATTTATGGC
 G C A T A G T C C T G A A T C G C A G T A C G T G A C T A C T G C G T A G A C T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C