Information for 15-TGTGTTHTGTGHBTGG (Motif 17)

A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G
Reverse Opposite:
A T G C A G T C C G T A T C G A C A G T A T G C C G T A A T G C C G T A C A T G C T G A C T G A A G T C C G T A A G T C C G T A
p-value:1e-9
log p-value:-2.222e+01
Information Content per bp:1.745
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.6 +/- 16.7bp
Average Position of motif in Background49.7 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTGTTHTGTGHBTGG
NNNNTTGTGTGCTTNN
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TGTGTTHTGTGHBTGG-----
---------TGATTGGCTANN
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TGTGTTHTGTGHBTGG-
-------TGGGTGTGGC
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGTGTTHTGTGHBTGG-------
--------CTGATTGGTCNATTT
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGTGTTHTGTGHBTGG----
--AGAGTGCTGATTGGTCCA
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:TGTGTTHTGTGHBTGG
--------CTGTCTGG
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGTGTTHTGTGHBTGG-----
----NNTNNTGTCTGGNNTNG
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TGTGTTHTGTGHBTGG--
------NTGGGTGTGGCC
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.49
Offset:12
Orientation:forward strand
Alignment:TGTGTTHTGTGHBTGG--
------------TTGGCA
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:TGTGTTHTGTGHBTGG
------CTGTTCCTGG
 A C G T A C T G G C A T T C A G A G C T A G C T G T A C A C G T A T C G C G A T T A C G G T C A A C G T A C G T C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G